BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D01SP1|AL424947
(1019 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1464 1678 0.0
>3x_Contig1464
Length = 11693
Score = 1678 bits (833), Expect = 0.0
Identities = 942/989 (95%), Gaps = 3/989 (0%)
Strand = Plus / Plus
Query: 15 tacgttatgatcaccaagagagattaactgcgaaagadgccatggagcataaattcttca 74
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 10677 tacgttatgatcaccaagagagattaactgcaaaagaagccatggagcataaattcttca 10736
Query: 75 aaaaagatttctcatagtgtatgcctaadcggtaatatatatctgttttctcatctctct 134
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 10737 aaaaagatttctcatagtgtatgcctaaacggtaatatatatctgttttctcatctctct 10796
Query: 135 atcatcaaattttcttttccctcttatcttccatttatggttaactttgggggattcttc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10797 atcatcaaattttcttttccctcttatcttccatttatggttaactttgggggattcttc 10856
Query: 195 ttctgtctttgattgctttccaattaaragcatgtatactaataacatataattgataca 254
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 10857 ttctgtctttgattgctttccaattaaaagcatgtatactaataacatataattaataca 10916
Query: 255 acacctgngaragaggacagaaacacatgtctcttttgcttaagatttaragragatgtr 314
||||||| | |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 10917 acacctgaaaaagaggacagaaacacatgtctcttttgcttaagatttaaagaagatgta 10976
Query: 315 atattatgatagtcgttaattcattaavrrggatatataattgrkrggtgtgatagctac 374
||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 10977 atattatgatagtcgttaattcattaaaaaggatatataattaataggtgtaatagctac 11036
Query: 375 caaacctgadagagaaggctcttactagcgcaggcgcagagagagagacactactatrag 434
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 11037 caaacctgaaagaaaaggctcttactagcgcaggcgcagagagagagacactactataag 11096
Query: 435 tgggagagggaatagaccaaagggatatgagacagggtggraatrgttacaadnrcccat 494
| ||| ||| ||||||||||||| |||||| ||||||||| ||| ||||||| |||||
Sbjct: 11097 taggaaaggaaatagaccaaaggaatatgaaacagggtggaaatagttacaaaaacccat 11156
Query: 495 gatcgasactattattgcggtgaaagttcagtgatgagaattgagaatgccattrttatt 554
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 11157 gatcgaaactattattgcggtgaaagttcagtgatgagaattgaaaatgccattattatt 11216
Query: 555 kgtctatgtttctcaatcacagggaaargbacaatcttttggtatcagatgcgtgaaggt 614
|||||| ||||||||||||||||||| ||||||||||||||||| |||||| ||| |
Sbjct: 11217 agtctatatttctcaatcacagggaaaaaaacaatcttttggtatcaaatgcgtaaagat 11276
Query: 615 cccagacctttgacggatttcgtgtagtatgctgtgttagtggatgggattttttgagag 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11277 cccagacctttgacggatttcgtgtagtatgctgtgttagtggatgggattttttaagag 11336
Query: 675 gtcagatttcttgggcgagtcagattacagttccatttcgtaatcttcatcgttttcctc 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11337 gtcagatttcttgggcgagtcagattacagttccatttcgtaatcttcatcgttttcctc 11396
Query: 735 gtcactgtcgtggacatcaagaatgaagcaatcctgcctcataatcatttcgttggccca 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11397 gtcactgtcgtggacatcaagaatgaagcaatcctgcctcataatcatttcgttggccca 11456
Query: 795 tgtatcgttgatggcactagttccatcataaatgacaccactatgatcgatctctcttgt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11457 tgtatcgttgatggcactagttccatcataaatgacaccactatgatcgatctctcttgt 11516
Query: 855 gcgaacactatcatcgaaccttatgttcttattgttcgagtggtgggagggtggagaacc 914
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11517 gcg-acactatcatcgaaccttatgttcttattgttcgagtggtgggagggtggagaacc 11575
Query: 915 gaagccagaagaattagtctttaccaaaataggcttgctattttcaaagatggatgaagc 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11576 gaagccagaagaattagtctttaccaaaataggcttgctattttcaaagatggatgaagc 11635
Query: 975 -tctgaattggttgggg-agaagagtaat 1001
|||||||||||||||| |||||||||||
Sbjct: 11636 atctgaattggttggggaagaagagtaat 11664
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6720
Number of Sequences: 1807
Number of extensions: 6720
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 1019
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1003
effective length of database: 10,329,639
effective search space: 10360627917
effective search space used: 10360627917
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)